Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.23■□□□□ 0.03
Nup58Q8R332 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup58Q8R332 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.23■□□□□ 0.03
Nup58Q8R332 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup58Q8R332 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nup58Q8R332 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup58Q8R332 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Nup58Q8R332 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nup58Q8R332 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.22■□□□□ 0.03
Nup58Q8R332 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm11025-201ENSMUST00000140773 466 ntBASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm37230-201ENSMUST00000194491 818 ntBASIC15.22■□□□□ 0.03
Nup58Q8R332 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.22■□□□□ 0.03
Nup58Q8R332 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.22■□□□□ 0.03
Nup58Q8R332 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nup58Q8R332 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Nup58Q8R332 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.21■□□□□ 0.03
Nup58Q8R332 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Nup58Q8R332 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.21■□□□□ 0.03
Nup58Q8R332 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nup58Q8R332 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup58Q8R332 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup58Q8R332 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup58Q8R332 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup58Q8R332 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Nup58Q8R332 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup58Q8R332 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nup58Q8R332 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.2■□□□□ 0.02
Nup58Q8R332 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nup58Q8R332 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Nup58Q8R332 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nup58Q8R332 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms