Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Chmp7Q8R1T1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Gm17794-201ENSMUST00000220252 955 ntBASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp7Q8R1T1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Gm27839-201ENSMUST00000184242 106 ntBASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Gm43094-201ENSMUST00000196549 921 ntBASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Gm19078-201ENSMUST00000206311 727 ntBASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp7Q8R1T1 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Gm38058-201ENSMUST00000194323 4368 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Gm11524-201ENSMUST00000119349 807 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Mir1894-201ENSMUST00000122802 81 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Gm8927-201ENSMUST00000181978 981 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Gm3222-201ENSMUST00000071282 990 ntBASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp7Q8R1T1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp7Q8R1T1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms