Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nudcd3Q8R1N4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm16026-204ENSMUST00000162652 683 ntBASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm28033-201ENSMUST00000184224 96 ntBASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Ank2-226ENSMUST00000189368 339 ntBASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm34391-201ENSMUST00000203706 907 ntBASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Nudcd3Q8R1N4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Gm7153-201ENSMUST00000117092 455 ntBASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nudcd3Q8R1N4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nudcd3Q8R1N4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms