Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm12585-201ENSMUST00000117307 290 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm16215-201ENSMUST00000161990 637 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm24694-201ENSMUST00000180054 110 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm9522-201ENSMUST00000182394 926 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm27663-201ENSMUST00000184839 110 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm18027-201ENSMUST00000218947 619 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gm2423-201ENSMUST00000074863 733 ntBASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rpp40Q8R1F9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Gm21470-201ENSMUST00000187680 696 ntBASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rpp40Q8R1F9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Gm7730-201ENSMUST00000212486 454 ntBASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Gm20445-201ENSMUST00000061905 565 ntBASIC15.16■□□□□ 0.02
Rpp40Q8R1F9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms