Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17■□□□□ 0.31
Col23a1Q8K4G2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Gm29608-201ENSMUST00000190444 463 ntBASIC17■□□□□ 0.31
Col23a1Q8K4G2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Gm44985-201ENSMUST00000206202 1016 ntBASIC17■□□□□ 0.31
Col23a1Q8K4G2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Gm7046-201ENSMUST00000221351 977 ntBASIC17■□□□□ 0.31
Col23a1Q8K4G2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Gm3756-201ENSMUST00000169182 1355 ntBASIC17■□□□□ 0.31
Col23a1Q8K4G2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col23a1Q8K4G2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col23a1Q8K4G2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Mir6979-201ENSMUST00000183927 56 ntBASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Gm37489-201ENSMUST00000191883 159 ntBASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.98■□□□□ 0.31
Col23a1Q8K4G2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col23a1Q8K4G2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms