Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.68■□□□□ 0.26
Shtn1Q8K2Q9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Gm9257-201ENSMUST00000221254 232 ntBASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Shtn1Q8K2Q9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gm15376-201ENSMUST00000122258 783 ntBASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gm15429-201ENSMUST00000151268 798 ntBASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Shtn1Q8K2Q9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.65■□□□□ 0.26
Shtn1Q8K2Q9 Gm27572-201ENSMUST00000183702 255 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms