Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Mir1897-201ENSMUST00000122581 272 ntBASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 AA543401-201ENSMUST00000164248 1269 ntBASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Shd-206ENSMUST00000225145 998 ntBASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rtn1Q8K0T0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Gm44608-201ENSMUST00000206827 855 ntBASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rtn1Q8K0T0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Mir6956-201ENSMUST00000183598 62 ntBASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rtn1Q8K0T0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Gm6888-201ENSMUST00000221983 706 ntBASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rtn1Q8K0T0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms