Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm8584-201ENSMUST00000171982 758 ntBASIC13.59□□□□□ -0.23
CroccQ8CJ40 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CroccQ8CJ40 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.58□□□□□ -0.23
CroccQ8CJ40 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CroccQ8CJ40 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CroccQ8CJ40 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CroccQ8CJ40 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CroccQ8CJ40 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.58□□□□□ -0.23
CroccQ8CJ40 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.58□□□□□ -0.24
CroccQ8CJ40 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CroccQ8CJ40 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Gm27680-201ENSMUST00000184192 160 ntBASIC13.57□□□□□ -0.24
CroccQ8CJ40 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.57□□□□□ -0.24
CroccQ8CJ40 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Gm8410-201ENSMUST00000117225 605 ntBASIC13.57□□□□□ -0.24
CroccQ8CJ40 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.57□□□□□ -0.24
CroccQ8CJ40 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CroccQ8CJ40 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CroccQ8CJ40 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms