Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm45504-201ENSMUST00000211407 2107 ntBASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip3Q8CHD8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Gm9908-201ENSMUST00000211534 448 ntBASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip3Q8CHD8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Gm13385-201ENSMUST00000121089 220 ntBASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Rab11fip3Q8CHD8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Gm12341-201ENSMUST00000119724 503 ntBASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip3Q8CHD8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip3Q8CHD8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rab11fip3Q8CHD8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms