Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Lrif1Q8CDD9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Lrif1Q8CDD9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm24513-201ENSMUST00000174964 138 ntBASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lrif1Q8CDD9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Gm27397-201ENSMUST00000184997 107 ntBASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lrif1Q8CDD9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms