Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Gm13823-201ENSMUST00000119930 345 ntBASIC16.53■□□□□ 0.24
Vps53Q8CCB4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Gm25144-201ENSMUST00000179561 110 ntBASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Gm25352-201ENSMUST00000179815 110 ntBASIC16.53■□□□□ 0.24
Vps53Q8CCB4 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.53■□□□□ 0.24
Vps53Q8CCB4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Vps53Q8CCB4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Gm18049-201ENSMUST00000208909 581 ntBASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Gm2423-201ENSMUST00000074863 733 ntBASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Vps53Q8CCB4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.52■□□□□ 0.23
Vps53Q8CCB4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vps53Q8CCB4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Gm2451-201ENSMUST00000199447 999 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Gm10290-201ENSMUST00000200451 999 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Olfr286-202ENSMUST00000205305 969 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vps53Q8CCB4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vps53Q8CCB4 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms