Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Gm16215-201ENSMUST00000161990 637 ntBASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Mir6977-201ENSMUST00000184960 64 ntBASIC16.52■□□□□ 0.24
Alx1Q8C8B0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Gm29741-201ENSMUST00000192667 421 ntBASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Gm7730-201ENSMUST00000212486 454 ntBASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Alx1Q8C8B0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Alx1Q8C8B0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Alx1Q8C8B0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.52■□□□□ 0.23
Alx1Q8C8B0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Alx1Q8C8B0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Alx1Q8C8B0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Alx1Q8C8B0 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Alx1Q8C8B0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm13385-201ENSMUST00000121089 220 ntBASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm8927-201ENSMUST00000181978 981 ntBASIC16.49■□□□□ 0.23
Alx1Q8C8B0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms