Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Carlr-201ENSMUST00000181515 2574 ntBASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Gm13350-201ENSMUST00000120519 479 ntBASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Gm5187-201ENSMUST00000117317 991 ntBASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Mir8109-201ENSMUST00000184375 117 ntBASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col6a6Q8C6K9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Olfr582-201ENSMUST00000098212 960 ntBASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Col6a6Q8C6K9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Gm12928-201ENSMUST00000117115 573 ntBASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Col6a6Q8C6K9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms