Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ptcd1Q8C2E4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Gm42790-201ENSMUST00000201268 969 ntBASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Olfr582-201ENSMUST00000098212 960 ntBASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ptcd1Q8C2E4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gm45784-201ENSMUST00000188360 142 ntBASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ptcd1Q8C2E4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Gm27486-201ENSMUST00000184923 80 ntBASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Gm37424-201ENSMUST00000191727 561 ntBASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ptcd1Q8C2E4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms