Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm44608-201ENSMUST00000206827 855 ntBASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm22189-201ENSMUST00000103822 86 ntBASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm6218-201ENSMUST00000219812 628 ntBASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdk5rap1Q8BTW8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdk5rap1Q8BTW8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cdk5rap1Q8BTW8 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap1Q8BTW8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdk5rap1Q8BTW8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.46□□□□□ -0.26
Cdk5rap1Q8BTW8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Gm12859-201ENSMUST00000117834 427 ntBASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdk5rap1Q8BTW8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms