Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smco3Q8BQM7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Rubie-203ENSMUST00000227803 2430 ntBASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smco3Q8BQM7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Gm12644-201ENSMUST00000119935 606 ntBASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Smco3Q8BQM7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms