Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Gm43514-201ENSMUST00000198852 424 ntBASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc40Q8BI79 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Gm11025-201ENSMUST00000140773 466 ntBASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Gm5264-201ENSMUST00000190584 848 ntBASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Gm45612-201ENSMUST00000211320 160 ntBASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc40Q8BI79 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Gm6973-201ENSMUST00000117080 721 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Gm15483-201ENSMUST00000120338 456 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Gm11543-201ENSMUST00000120758 370 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Gm18737-201ENSMUST00000173594 937 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc40Q8BI79 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms