Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim6Q8BGE7 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Gm13036-201ENSMUST00000117799 748 ntBASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Gm11452-201ENSMUST00000122376 690 ntBASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim6Q8BGE7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim6Q8BGE7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim6Q8BGE7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim6Q8BGE7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.08■□□□□ 0.01
Trim6Q8BGE7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.08■□□□□ 0
Trim6Q8BGE7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Gm2272-201ENSMUST00000194903 582 ntBASIC15.08■□□□□ 0
Trim6Q8BGE7 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.08■□□□□ 0
Trim6Q8BGE7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim6Q8BGE7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.08■□□□□ 0
Trim6Q8BGE7 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.08■□□□□ 0
Trim6Q8BGE7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim6Q8BGE7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.07■□□□□ 0
Trim6Q8BGE7 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim6Q8BGE7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim6Q8BGE7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms