Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.56□□□□□ -0.24
Vrk1Q80X41 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.56□□□□□ -0.24
Vrk1Q80X41 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Efs-202ENSMUST00000227037 2540 ntBASIC13.56□□□□□ -0.24
Vrk1Q80X41 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.55□□□□□ -0.24
Vrk1Q80X41 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.55□□□□□ -0.24
Vrk1Q80X41 Mir6392-201ENSMUST00000184924 108 ntBASIC13.55□□□□□ -0.24
Vrk1Q80X41 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Gm19220-201ENSMUST00000222682 803 ntBASIC13.55□□□□□ -0.24
Vrk1Q80X41 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vrk1Q80X41 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vrk1Q80X41 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.54□□□□□ -0.24
Vrk1Q80X41 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vrk1Q80X41 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms