Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Gm24543-201ENSMUST00000103867 82 ntBASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf38bQ80SY5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Gm18624-201ENSMUST00000220966 658 ntBASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf38bQ80SY5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Prpf38bQ80SY5 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Prpf38bQ80SY5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf38bQ80SY5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Prpf38bQ80SY5 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf38bQ80SY5 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms