Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm29667-201ENSMUST00000190817 490 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 AA619741-201ENSMUST00000195095 646 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm43703-201ENSMUST00000200523 763 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdh8Q7TSK3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Gm15321-201ENSMUST00000121290 288 ntBASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Gm45751-201ENSMUST00000210185 1573 ntBASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdh8Q7TSK3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Gm6218-201ENSMUST00000219812 628 ntBASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pcdh8Q7TSK3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdh8Q7TSK3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms