Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.57□□□□□ -0.56
Vma21Q78T54 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm27301-201ENSMUST00000184012 127 ntBASIC11.57□□□□□ -0.56
Vma21Q78T54 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm37230-201ENSMUST00000194491 818 ntBASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm45747-201ENSMUST00000212203 999 ntBASIC11.57□□□□□ -0.56
Vma21Q78T54 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Vma21Q78T54 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Vma21Q78T54 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gm12350-201ENSMUST00000121208 462 ntBASIC11.56□□□□□ -0.56
Vma21Q78T54 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gm5177-201ENSMUST00000183092 997 ntBASIC11.56□□□□□ -0.56
Vma21Q78T54 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.56□□□□□ -0.56
Vma21Q78T54 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.56□□□□□ -0.56
Vma21Q78T54 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.56□□□□□ -0.56
Vma21Q78T54 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Vma21Q78T54 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Vma21Q78T54 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Gm5479-201ENSMUST00000160578 435 ntBASIC11.55□□□□□ -0.56
Vma21Q78T54 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.55□□□□□ -0.56
Vma21Q78T54 Gm2651-201ENSMUST00000203560 838 ntBASIC11.55□□□□□ -0.56
Vma21Q78T54 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.55□□□□□ -0.56
Vma21Q78T54 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Vma21Q78T54 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.55□□□□□ -0.56
Vma21Q78T54 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms