Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Mir1247-201ENSMUST00000116706 82 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm6091-201ENSMUST00000098307 165 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gm5763-201ENSMUST00000155951 1530 ntBASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Syne1Q6ZWR6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm42690-201ENSMUST00000197921 1836 ntBASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm37424-201ENSMUST00000191727 561 ntBASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 AC122459.1-201ENSMUST00000228373 885 ntBASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm12390-201ENSMUST00000117897 397 ntBASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Gm5303-201ENSMUST00000117943 1252 ntBASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 AA619741-201ENSMUST00000195095 646 ntBASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Syne1Q6ZWR6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms