Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herc4Q6PAV2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Herc4Q6PAV2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Gm6415-201ENSMUST00000118488 348 ntBASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Gm45453-201ENSMUST00000211758 853 ntBASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Herc4Q6PAV2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 AA619741-201ENSMUST00000195095 646 ntBASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herc4Q6PAV2 BC001981-202ENSMUST00000191393 1545 ntBASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.68■□□□□ 0.1
Herc4Q6PAV2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Gm15957-201ENSMUST00000118893 974 ntBASIC15.67■□□□□ 0.1
Herc4Q6PAV2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herc4Q6PAV2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Herc4Q6PAV2 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms