Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Gm42550-201ENSMUST00000201553 960 ntBASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Itm2b-204ENSMUST00000228637 783 ntBASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Slx4Q6P1D7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Gm43068-201ENSMUST00000201095 1273 ntBASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Slx4Q6P1D7 AC162938.1-201ENSMUST00000213140 2323 ntBASIC21.46■■□□□ 1.03
Slx4Q6P1D7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC21.45■■□□□ 1.03
Slx4Q6P1D7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Slx4Q6P1D7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm12241-201ENSMUST00000118330 726 ntBASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm25261-201ENSMUST00000157416 134 ntBASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm37922-201ENSMUST00000195596 455 ntBASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm17870-201ENSMUST00000219489 1174 ntBASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Gm11960-202ENSMUST00000181063 2858 ntBASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slx4Q6P1D7 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Gm11400-201ENSMUST00000120853 1214 ntBASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Gm12176-201ENSMUST00000121420 875 ntBASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Gm29741-201ENSMUST00000192667 421 ntBASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Gm2824-203ENSMUST00000226189 1228 ntBASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slx4Q6P1D7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gm6621-201ENSMUST00000193251 772 ntBASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 n-R5s195-201ENSMUST00000082891 119 ntBASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gm10268-201ENSMUST00000085340 555 ntBASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gm37411-201ENSMUST00000194180 2282 ntBASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gm44981-201ENSMUST00000205549 1943 ntBASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Gm9867-201ENSMUST00000192212 2647 ntBASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC21.43■■□□□ 1.02
Slx4Q6P1D7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slx4Q6P1D7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms