Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SnrpaQ62189 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SnrpaQ62189 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SnrpaQ62189 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SnrpaQ62189 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.27□□□□□ -0.12
SnrpaQ62189 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SnrpaQ62189 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SnrpaQ62189 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SnrpaQ62189 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.27□□□□□ -0.13
SnrpaQ62189 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.27□□□□□ -0.13
SnrpaQ62189 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.27□□□□□ -0.13
SnrpaQ62189 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SnrpaQ62189 Mir5131-201ENSMUST00000175426 93 ntBASIC14.27□□□□□ -0.13
SnrpaQ62189 Gm28659-201ENSMUST00000188013 759 ntBASIC14.27□□□□□ -0.13
SnrpaQ62189 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SnrpaQ62189 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SnrpaQ62189 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SnrpaQ62189 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SnrpaQ62189 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SnrpaQ62189 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.26□□□□□ -0.13
SnrpaQ62189 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.26□□□□□ -0.13
SnrpaQ62189 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.26□□□□□ -0.13
SnrpaQ62189 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SnrpaQ62189 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SnrpaQ62189 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.26□□□□□ -0.13
SnrpaQ62189 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
SnrpaQ62189 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SnrpaQ62189 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.25□□□□□ -0.13
SnrpaQ62189 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Gm9385-201ENSMUST00000117563 472 ntBASIC14.25□□□□□ -0.13
SnrpaQ62189 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.25□□□□□ -0.13
SnrpaQ62189 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SnrpaQ62189 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.25□□□□□ -0.13
SnrpaQ62189 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.24□□□□□ -0.13
SnrpaQ62189 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SnrpaQ62189 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.24□□□□□ -0.13
SnrpaQ62189 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.24□□□□□ -0.13
SnrpaQ62189 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.24□□□□□ -0.13
SnrpaQ62189 Gm15483-201ENSMUST00000120338 456 ntBASIC14.24□□□□□ -0.13
SnrpaQ62189 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms