Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccne1Q61457 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.37■□□□□ 0.53
Ccne1Q61457 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ccne1Q61457 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Gm13689-201ENSMUST00000119360 685 ntBASIC18.37■□□□□ 0.53
Ccne1Q61457 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccne1Q61457 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.37■□□□□ 0.53
Ccne1Q61457 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.37■□□□□ 0.53
Ccne1Q61457 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccne1Q61457 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.37■□□□□ 0.53
Ccne1Q61457 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccne1Q61457 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccne1Q61457 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccne1Q61457 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccne1Q61457 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Gm8835-201ENSMUST00000173096 1169 ntBASIC18.36■□□□□ 0.53
Ccne1Q61457 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.36■□□□□ 0.53
Ccne1Q61457 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccne1Q61457 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccne1Q61457 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccne1Q61457 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccne1Q61457 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccne1Q61457 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccne1Q61457 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Ccne1Q61457 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Mir1938-201ENSMUST00000158746 100 ntBASIC18.35■□□□□ 0.53
Ccne1Q61457 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccne1Q61457 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ccne1Q61457 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccne1Q61457 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.34■□□□□ 0.53
Ccne1Q61457 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm12928-201ENSMUST00000117115 573 ntBASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.34■□□□□ 0.53
Ccne1Q61457 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm24420-201ENSMUST00000176676 59 ntBASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm7287-201ENSMUST00000205267 602 ntBASIC18.34■□□□□ 0.53
Ccne1Q61457 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccne1Q61457 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccne1Q61457 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.33■□□□□ 0.53
Ccne1Q61457 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccne1Q61457 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms