Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Gm13616-201ENSMUST00000120600 222 ntBASIC13.87□□□□□ -0.19
Vsx2Q61412 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Gm25948-201ENSMUST00000175334 112 ntBASIC13.87□□□□□ -0.19
Vsx2Q61412 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.87□□□□□ -0.19
Vsx2Q61412 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.87□□□□□ -0.19
Vsx2Q61412 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vsx2Q61412 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vsx2Q61412 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.86□□□□□ -0.19
Vsx2Q61412 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.86□□□□□ -0.19
Vsx2Q61412 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Gm9824-201ENSMUST00000178707 561 ntBASIC13.86□□□□□ -0.19
Vsx2Q61412 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Gm5779-201ENSMUST00000218467 910 ntBASIC13.86□□□□□ -0.19
Vsx2Q61412 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vsx2Q61412 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vsx2Q61412 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vsx2Q61412 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.85□□□□□ -0.19
Vsx2Q61412 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vsx2Q61412 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.85□□□□□ -0.19
Vsx2Q61412 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.85□□□□□ -0.19
Vsx2Q61412 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.85□□□□□ -0.19
Vsx2Q61412 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vsx2Q61412 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms