Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
FntaQ61239 Gm27300-201ENSMUST00000184085 97 ntBASIC15.03■□□□□ -0
FntaQ61239 Gm27335-201ENSMUST00000184758 97 ntBASIC15.03■□□□□ -0
FntaQ61239 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.03■□□□□ -0
FntaQ61239 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.03■□□□□ -0
FntaQ61239 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.03■□□□□ -0
FntaQ61239 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FntaQ61239 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
FntaQ61239 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
FntaQ61239 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
FntaQ61239 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.02■□□□□ -0
FntaQ61239 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.02■□□□□ -0
FntaQ61239 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
FntaQ61239 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.02■□□□□ -0
FntaQ61239 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.02■□□□□ -0
FntaQ61239 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.02■□□□□ -0
FntaQ61239 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
FntaQ61239 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.02■□□□□ -0
FntaQ61239 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.02□□□□□ -0.01
FntaQ61239 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
FntaQ61239 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.02□□□□□ -0.01
FntaQ61239 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
FntaQ61239 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.02□□□□□ -0.01
FntaQ61239 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
FntaQ61239 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
FntaQ61239 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
FntaQ61239 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.01□□□□□ -0.01
FntaQ61239 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Gm16026-204ENSMUST00000162652 683 ntBASIC15.01□□□□□ -0.01
FntaQ61239 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.01□□□□□ -0.01
FntaQ61239 Gm9182-201ENSMUST00000217829 639 ntBASIC15.01□□□□□ -0.01
FntaQ61239 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
FntaQ61239 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.01□□□□□ -0.01
FntaQ61239 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.01□□□□□ -0.01
FntaQ61239 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
FntaQ61239 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.01□□□□□ -0.01
FntaQ61239 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
FntaQ61239 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15□□□□□ -0.01
FntaQ61239 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
FntaQ61239 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
FntaQ61239 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FntaQ61239 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FntaQ61239 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
FntaQ61239 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms