Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Gm27867-201ENSMUST00000184778 125 ntBASIC17.03■□□□□ 0.32
Mre11Q61216 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Mre11Q61216 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Mre11Q61216 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mre11Q61216 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.03■□□□□ 0.32
Mre11Q61216 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.03■□□□□ 0.32
Mre11Q61216 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mre11Q61216 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.02■□□□□ 0.32
Mre11Q61216 Gm29518-201ENSMUST00000190858 372 ntBASIC17.02■□□□□ 0.32
Mre11Q61216 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Mre11Q61216 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mre11Q61216 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mre11Q61216 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mre11Q61216 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Mre11Q61216 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mre11Q61216 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Mre11Q61216 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Gm19087-201ENSMUST00000191430 946 ntBASIC17.01■□□□□ 0.31
Mre11Q61216 Gm17808-201ENSMUST00000200859 894 ntBASIC17.01■□□□□ 0.31
Mre11Q61216 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.01■□□□□ 0.31
Mre11Q61216 Gm6296-201ENSMUST00000222599 943 ntBASIC17.01■□□□□ 0.31
Mre11Q61216 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Mre11Q61216 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Mre11Q61216 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC17.01■□□□□ 0.31
Mre11Q61216 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Mre11Q61216 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Mre11Q61216 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC17■□□□□ 0.31
Mre11Q61216 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17■□□□□ 0.31
Mre11Q61216 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC17■□□□□ 0.31
Mre11Q61216 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Mre11Q61216 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Gm44241-201ENSMUST00000203230 1662 ntBASIC17■□□□□ 0.31
Mre11Q61216 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17■□□□□ 0.31
Mre11Q61216 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mre11Q61216 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Mre11Q61216 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Mre11Q61216 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mre11Q61216 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mre11Q61216 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mre11Q61216 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Mre11Q61216 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Mre11Q61216 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms