Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm11628-201ENSMUST00000117568 171 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm18212-201ENSMUST00000211678 889 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm16479-201ENSMUST00000121706 932 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Col12a1Q60847 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm13123-201ENSMUST00000122173 492 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm10752-201ENSMUST00000218348 729 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.71□□□□□ -0.21
Col12a1Q60847 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm7857-201ENSMUST00000117957 358 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm5051-201ENSMUST00000204085 485 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.71□□□□□ -0.21
Col12a1Q60847 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Col12a1Q60847 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col12a1Q60847 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col12a1Q60847 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Col12a1Q60847 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Col12a1Q60847 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Col12a1Q60847 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Col12a1Q60847 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm14130-201ENSMUST00000118417 987 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm11222-201ENSMUST00000119005 738 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm13570-201ENSMUST00000140763 309 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm11964-201ENSMUST00000120982 444 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm27023-201ENSMUST00000182372 285 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm24830-201ENSMUST00000102024 166 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm12217-201ENSMUST00000118858 696 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm25890-201ENSMUST00000177643 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm22614-201ENSMUST00000178300 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Col12a1Q60847 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm22042-201ENSMUST00000082989 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm26232-201ENSMUST00000083360 166 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Gm24136-201ENSMUST00000083374 165 ntBASIC13.7□□□□□ -0.22
Col12a1Q60847 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms