Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Gm25990-201ENSMUST00000102440 86 ntBASIC11.03□□□□□ -0.64
Trav15-1-dv6-1Q5R1D2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms