Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rapgef1Q3UHC1 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Gm25948-201ENSMUST00000175334 112 ntBASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rapgef1Q3UHC1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Gm6973-201ENSMUST00000117080 721 ntBASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Gm27920-201ENSMUST00000183953 96 ntBASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rapgef1Q3UHC1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rapgef1Q3UHC1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms