Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Spg11Q3UHA3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Gm10146-201ENSMUST00000072739 309 ntBASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Spg11Q3UHA3 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Gm5687-201ENSMUST00000118252 640 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Gm18027-201ENSMUST00000218947 619 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Spg11Q3UHA3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm9726-201ENSMUST00000180321 678 ntBASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm7600-201ENSMUST00000209657 785 ntBASIC12.91□□□□□ -0.34
Spg11Q3UHA3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.91□□□□□ -0.34
Spg11Q3UHA3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms