Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Puf60Q3UEB3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Puf60Q3UEB3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Puf60Q3UEB3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Puf60Q3UEB3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Puf60Q3UEB3 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm16342-201ENSMUST00000124025 1025 ntBASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm8835-201ENSMUST00000173096 1169 ntBASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC19.36■□□□□ 0.69
Puf60Q3UEB3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Gm27486-201ENSMUST00000184923 80 ntBASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Gm7561-201ENSMUST00000211203 886 ntBASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Puf60Q3UEB3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Gm11814-201ENSMUST00000119515 929 ntBASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Gm14730-201ENSMUST00000122378 1045 ntBASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Gm7498-201ENSMUST00000203282 1084 ntBASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Puf60Q3UEB3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.33■□□□□ 0.69
Puf60Q3UEB3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Puf60Q3UEB3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Puf60Q3UEB3 Gm29741-201ENSMUST00000192667 421 ntBASIC19.33■□□□□ 0.68
Puf60Q3UEB3 Gm6983-201ENSMUST00000214912 628 ntBASIC19.33■□□□□ 0.68
Puf60Q3UEB3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC19.33■□□□□ 0.68
Puf60Q3UEB3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Puf60Q3UEB3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Puf60Q3UEB3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms