Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col19a1Q0VF58 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm7029-201ENSMUST00000173226 450 ntBASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gm5161-201ENSMUST00000075243 853 ntBASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col19a1Q0VF58 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Gm20482-202ENSMUST00000174729 825 ntBASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Gm6222-202ENSMUST00000182143 629 ntBASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
Col19a1Q0VF58 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gm25668-201ENSMUST00000157700 129 ntBASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gm24514-201ENSMUST00000174961 285 ntBASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col19a1Q0VF58 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col19a1Q0VF58 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col19a1Q0VF58 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col19a1Q0VF58 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col19a1Q0VF58 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col19a1Q0VF58 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col19a1Q0VF58 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col19a1Q0VF58 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col19a1Q0VF58 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col19a1Q0VF58 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms