Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Tff1Q08423 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tff1Q08423 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Tff1Q08423 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tff1Q08423 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.82□□□□□ -0.52
Tff1Q08423 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tff1Q08423 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Tff1Q08423 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tff1Q08423 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.81□□□□□ -0.52
Tff1Q08423 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.81□□□□□ -0.52
Tff1Q08423 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.81□□□□□ -0.52
Tff1Q08423 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.81□□□□□ -0.52
Tff1Q08423 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tff1Q08423 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.81□□□□□ -0.52
Tff1Q08423 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.81□□□□□ -0.52
Tff1Q08423 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tff1Q08423 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tff1Q08423 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tff1Q08423 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tff1Q08423 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tff1Q08423 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.81□□□□□ -0.52
Tff1Q08423 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.8□□□□□ -0.52
Tff1Q08423 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.8□□□□□ -0.52
Tff1Q08423 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.8□□□□□ -0.52
Tff1Q08423 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.8□□□□□ -0.52
Tff1Q08423 Gm2451-201ENSMUST00000199447 999 ntBASIC11.8□□□□□ -0.52
Tff1Q08423 Gm10290-201ENSMUST00000200451 999 ntBASIC11.8□□□□□ -0.52
Tff1Q08423 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.8□□□□□ -0.52
Tff1Q08423 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.8□□□□□ -0.52
Tff1Q08423 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms