Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox4Q06831 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.95□□□□□ -0.18
Sox4Q06831 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox4Q06831 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Sox4Q06831 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.95□□□□□ -0.18
Sox4Q06831 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox4Q06831 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Sox4Q06831 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox4Q06831 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Gm9229-201ENSMUST00000222777 126 ntBASIC13.95□□□□□ -0.18
Sox4Q06831 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sox4Q06831 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox4Q06831 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.95□□□□□ -0.18
Sox4Q06831 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox4Q06831 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.94□□□□□ -0.18
Sox4Q06831 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox4Q06831 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox4Q06831 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.94□□□□□ -0.18
Sox4Q06831 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.94□□□□□ -0.18
Sox4Q06831 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.94□□□□□ -0.18
Sox4Q06831 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Sox4Q06831 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.94□□□□□ -0.18
Sox4Q06831 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.94□□□□□ -0.18
Sox4Q06831 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Sox4Q06831 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox4Q06831 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox4Q06831 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox4Q06831 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Gm14057-201ENSMUST00000120631 482 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox4Q06831 Mir8102-201ENSMUST00000184148 139 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Gm33320-201ENSMUST00000192232 530 ntBASIC13.93□□□□□ -0.18
Sox4Q06831 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox4Q06831 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.93□□□□□ -0.18
Sox4Q06831 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms