Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.27□□□□□ -0.12
Pfdn6Q03958 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pfdn6Q03958 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Gm27525-201ENSMUST00000184465 107 ntBASIC14.27□□□□□ -0.13
Pfdn6Q03958 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.27□□□□□ -0.13
Pfdn6Q03958 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pfdn6Q03958 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.26□□□□□ -0.13
Pfdn6Q03958 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.26□□□□□ -0.13
Pfdn6Q03958 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.26□□□□□ -0.13
Pfdn6Q03958 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.26□□□□□ -0.13
Pfdn6Q03958 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.26□□□□□ -0.13
Pfdn6Q03958 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.25□□□□□ -0.13
Pfdn6Q03958 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.25□□□□□ -0.13
Pfdn6Q03958 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms