Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm15460-201ENSMUST00000118147 391 ntBASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm15240-201ENSMUST00000118156 720 ntBASIC13.08□□□□□ -0.32
Cacna1aP97445 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
Cacna1aP97445 Gm27572-201ENSMUST00000183702 255 ntBASIC13.08□□□□□ -0.32
Cacna1aP97445 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.08□□□□□ -0.32
Cacna1aP97445 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cacna1aP97445 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cacna1aP97445 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cacna1aP97445 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Mir8109-201ENSMUST00000184375 117 ntBASIC13.07□□□□□ -0.32
Cacna1aP97445 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Gm22902-201ENSMUST00000158488 302 ntBASIC13.07□□□□□ -0.32
Cacna1aP97445 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.07□□□□□ -0.32
Cacna1aP97445 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cacna1aP97445 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.06□□□□□ -0.32
Cacna1aP97445 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm3961-201ENSMUST00000204425 994 ntBASIC13.06□□□□□ -0.32
Cacna1aP97445 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm17795-201ENSMUST00000214505 757 ntBASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.06□□□□□ -0.32
Cacna1aP97445 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cacna1aP97445 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms