Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
PrkdcP97313 Gm44967-201ENSMUST00000207047 631 ntBASIC9.45□□□□□ -0.9
PrkdcP97313 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
PrkdcP97313 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Abhd6-203ENSMUST00000225234 1958 ntBASIC9.44□□□□□ -0.9
PrkdcP97313 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
PrkdcP97313 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Gm11597-201ENSMUST00000121423 964 ntBASIC9.44□□□□□ -0.9
PrkdcP97313 Gm28450-201ENSMUST00000187349 638 ntBASIC9.44□□□□□ -0.9
PrkdcP97313 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC9.44□□□□□ -0.9
PrkdcP97313 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PrkdcP97313 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
PrkdcP97313 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC9.44□□□□□ -0.9
PrkdcP97313 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PrkdcP97313 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.44□□□□□ -0.9
PrkdcP97313 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
PrkdcP97313 Gm4081-201ENSMUST00000195287 1838 ntBASIC9.44□□□□□ -0.9
PrkdcP97313 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC9.44□□□□□ -0.9
PrkdcP97313 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
PrkdcP97313 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 AC131330.1-201ENSMUST00000227814 1015 ntBASIC9.44□□□□□ -0.9
PrkdcP97313 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
PrkdcP97313 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.44□□□□□ -0.9
PrkdcP97313 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
PrkdcP97313 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 Gm20392-201ENSMUST00000173047 701 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 Gm38144-201ENSMUST00000192790 465 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC9.43□□□□□ -0.9
PrkdcP97313 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Gm45224-201ENSMUST00000208203 414 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
PrkdcP97313 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 Gm13665-201ENSMUST00000120830 528 ntBASIC9.43□□□□□ -0.9
PrkdcP97313 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
PrkdcP97313 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
PrkdcP97313 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PrkdcP97313 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PrkdcP97313 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PrkdcP97313 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC9.42□□□□□ -0.9
PrkdcP97313 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms