Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.44■□□□□ 0.06
Trim43cP86449 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim43cP86449 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.44■□□□□ 0.06
Trim43cP86449 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.44■□□□□ 0.06
Trim43cP86449 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.44■□□□□ 0.06
Trim43cP86449 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
Trim43cP86449 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim43cP86449 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.43■□□□□ 0.06
Trim43cP86449 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim43cP86449 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Trim43cP86449 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim43cP86449 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim43cP86449 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim43cP86449 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim43cP86449 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.43■□□□□ 0.06
Trim43cP86449 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim43cP86449 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.43■□□□□ 0.06
Trim43cP86449 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim43cP86449 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43cP86449 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim43cP86449 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim43cP86449 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.43■□□□□ 0.06
Trim43cP86449 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trim43cP86449 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Gm13223-201ENSMUST00000118609 747 ntBASIC15.42■□□□□ 0.06
Trim43cP86449 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim43cP86449 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.42■□□□□ 0.06
Trim43cP86449 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43cP86449 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Trim43cP86449 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.41■□□□□ 0.06
Trim43cP86449 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim43cP86449 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Trim43cP86449 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim43cP86449 Gm13616-201ENSMUST00000120600 222 ntBASIC15.41■□□□□ 0.06
Trim43cP86449 Mir1897-201ENSMUST00000122581 272 ntBASIC15.41■□□□□ 0.06
Trim43cP86449 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.41■□□□□ 0.06
Trim43cP86449 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43cP86449 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.41■□□□□ 0.06
Trim43cP86449 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim43cP86449 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms