Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ybx1P62960 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ybx1P62960 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ybx1P62960 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ybx1P62960 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ybx1P62960 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ybx1P62960 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ybx1P62960 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ybx1P62960 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.51□□□□□ -0.09
Ybx1P62960 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ybx1P62960 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Gm15957-201ENSMUST00000118893 974 ntBASIC14.51□□□□□ -0.09
Ybx1P62960 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ybx1P62960 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ybx1P62960 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Ybx1P62960 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ybx1P62960 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ybx1P62960 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Ybx1P62960 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Ybx1P62960 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ybx1P62960 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ybx1P62960 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Gm11425-201ENSMUST00000119608 498 ntBASIC14.5□□□□□ -0.09
Ybx1P62960 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ybx1P62960 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ybx1P62960 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ybx1P62960 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.5□□□□□ -0.09
Ybx1P62960 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ybx1P62960 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ybx1P62960 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.5□□□□□ -0.09
Ybx1P62960 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Ybx1P62960 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Gm9396-201ENSMUST00000076703 567 ntBASIC14.5□□□□□ -0.09
Ybx1P62960 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.5□□□□□ -0.09
Ybx1P62960 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ybx1P62960 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.49□□□□□ -0.09
Ybx1P62960 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
Ybx1P62960 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Ybx1P62960 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.49□□□□□ -0.09
Ybx1P62960 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.49□□□□□ -0.09
Ybx1P62960 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.49□□□□□ -0.09
Ybx1P62960 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.49□□□□□ -0.09
Ybx1P62960 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ybx1P62960 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ybx1P62960 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Ybx1P62960 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ybx1P62960 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ybx1P62960 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms