Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
Rps28P62858 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC8.27□□□□□ -1.08
Rps28P62858 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rps28P62858 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Rps28P62858 Gm2128-201ENSMUST00000108009 2560 ntBASIC8.27□□□□□ -1.08
Rps28P62858 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Rps28P62858 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
Rps28P62858 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.08
Rps28P62858 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.27□□□□□ -1.09
Rps28P62858 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Gm13401-201ENSMUST00000117074 291 ntBASIC8.27□□□□□ -1.09
Rps28P62858 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC8.27□□□□□ -1.09
Rps28P62858 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Nkain2-201ENSMUST00000092602 558 ntBASIC8.27□□□□□ -1.09
Rps28P62858 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Rps28P62858 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Rps28P62858 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Rps28P62858 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Rps28P62858 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC8.26□□□□□ -1.09
Rps28P62858 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Rps28P62858 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Rps28P62858 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC8.26□□□□□ -1.09
Rps28P62858 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rps28P62858 AC123834.1-201ENSMUST00000225346 2043 ntBASIC8.26□□□□□ -1.09
Rps28P62858 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Rps28P62858 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Rps28P62858 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.26□□□□□ -1.09
Rps28P62858 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC8.26□□□□□ -1.09
Rps28P62858 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Rps28P62858 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Rps28P62858 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Rps28P62858 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Rps28P62858 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms