Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.16□□□□□ -0.78
Cks1bP61025 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.16□□□□□ -0.78
Cks1bP61025 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cks1bP61025 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.15□□□□□ -0.78
Cks1bP61025 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.15□□□□□ -0.78
Cks1bP61025 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.15□□□□□ -0.78
Cks1bP61025 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.15□□□□□ -0.78
Cks1bP61025 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.15□□□□□ -0.78
Cks1bP61025 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Cks1bP61025 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Cks1bP61025 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Cks1bP61025 Grk6-207ENSMUST00000225925 2769 ntBASIC10.15□□□□□ -0.78
Cks1bP61025 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.15□□□□□ -0.78
Cks1bP61025 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.15□□□□□ -0.78
Cks1bP61025 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cks1bP61025 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Cks1bP61025 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Cks1bP61025 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Cks1bP61025 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cks1bP61025 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cks1bP61025 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.14□□□□□ -0.79
Cks1bP61025 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Cks1bP61025 Gm6345-202ENSMUST00000180900 204 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 AC159093.1-201ENSMUST00000227779 380 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cks1bP61025 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.14□□□□□ -0.79
Cks1bP61025 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cks1bP61025 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms