Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sssca1P56873 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sssca1P56873 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.48□□□□□ -0.57
Sssca1P56873 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.48□□□□□ -0.57
Sssca1P56873 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Gm16026-204ENSMUST00000162652 683 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Gm10060-201ENSMUST00000212002 111 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sssca1P56873 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Gm10154-201ENSMUST00000084445 354 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.48□□□□□ -0.57
Sssca1P56873 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.48□□□□□ -0.57
Sssca1P56873 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.48□□□□□ -0.57
Sssca1P56873 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.48□□□□□ -0.57
Sssca1P56873 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sssca1P56873 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sssca1P56873 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Gm13036-201ENSMUST00000117799 748 ntBASIC11.47□□□□□ -0.57
Sssca1P56873 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.47□□□□□ -0.57
Sssca1P56873 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.47□□□□□ -0.57
Sssca1P56873 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.47□□□□□ -0.57
Sssca1P56873 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sssca1P56873 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sssca1P56873 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Sssca1P56873 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms