Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Gm45453-201ENSMUST00000211758 853 ntBASIC13.18□□□□□ -0.3
CckbrP56481 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.18□□□□□ -0.3
CckbrP56481 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CckbrP56481 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CckbrP56481 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CckbrP56481 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CckbrP56481 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CckbrP56481 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
CckbrP56481 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CckbrP56481 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Gm8410-201ENSMUST00000117225 605 ntBASIC13.17□□□□□ -0.3
CckbrP56481 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.17□□□□□ -0.3
CckbrP56481 Gm13616-201ENSMUST00000120600 222 ntBASIC13.17□□□□□ -0.3
CckbrP56481 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.17□□□□□ -0.3
CckbrP56481 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.17□□□□□ -0.3
CckbrP56481 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CckbrP56481 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CckbrP56481 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.16□□□□□ -0.3
CckbrP56481 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CckbrP56481 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CckbrP56481 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CckbrP56481 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CckbrP56481 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CckbrP56481 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Gm22175-201ENSMUST00000175007 78 ntBASIC13.16□□□□□ -0.3
CckbrP56481 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Gm28630-201ENSMUST00000187806 498 ntBASIC13.16□□□□□ -0.3
CckbrP56481 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.16□□□□□ -0.3
CckbrP56481 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
CckbrP56481 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CckbrP56481 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CckbrP56481 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CckbrP56481 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CckbrP56481 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.15□□□□□ -0.3
CckbrP56481 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CckbrP56481 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CckbrP56481 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CckbrP56481 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms