Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdkn2bP55271 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdkn2bP55271 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkn2bP55271 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkn2bP55271 Acot6-202ENSMUST00000222921 3622 ntBASIC13.58□□□□□ -0.23
Cdkn2bP55271 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkn2bP55271 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cdkn2bP55271 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.58□□□□□ -0.24
Cdkn2bP55271 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.58□□□□□ -0.24
Cdkn2bP55271 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.58□□□□□ -0.24
Cdkn2bP55271 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cdkn2bP55271 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Gm6973-201ENSMUST00000117080 721 ntBASIC13.57□□□□□ -0.24
Cdkn2bP55271 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdkn2bP55271 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cdkn2bP55271 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.56□□□□□ -0.24
Cdkn2bP55271 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.56□□□□□ -0.24
Cdkn2bP55271 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdkn2bP55271 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms