Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CtskP55097 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CtskP55097 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CtskP55097 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CtskP55097 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
CtskP55097 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CtskP55097 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CtskP55097 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CtskP55097 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CtskP55097 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CtskP55097 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CtskP55097 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
CtskP55097 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.95□□□□□ -0.18
CtskP55097 Gm8749-201ENSMUST00000117737 331 ntBASIC13.95□□□□□ -0.18
CtskP55097 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
CtskP55097 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.95□□□□□ -0.18
CtskP55097 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.95□□□□□ -0.18
CtskP55097 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.95□□□□□ -0.18
CtskP55097 Gm6222-201ENSMUST00000120787 396 ntBASIC13.95□□□□□ -0.18
CtskP55097 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.95□□□□□ -0.18
CtskP55097 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.95□□□□□ -0.18
CtskP55097 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Gm29667-201ENSMUST00000190817 490 ntBASIC13.95□□□□□ -0.18
CtskP55097 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.95□□□□□ -0.18
CtskP55097 Gm46209-201ENSMUST00000217912 553 ntBASIC13.95□□□□□ -0.18
CtskP55097 Dupd1-202ENSMUST00000224735 548 ntBASIC13.95□□□□□ -0.18
CtskP55097 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CtskP55097 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CtskP55097 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CtskP55097 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CtskP55097 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.95□□□□□ -0.18
CtskP55097 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CtskP55097 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CtskP55097 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CtskP55097 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CtskP55097 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.94□□□□□ -0.18
CtskP55097 Gm27631-201ENSMUST00000184163 466 ntBASIC13.94□□□□□ -0.18
CtskP55097 Gm43703-201ENSMUST00000200523 763 ntBASIC13.94□□□□□ -0.18
CtskP55097 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.94□□□□□ -0.18
CtskP55097 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.94□□□□□ -0.18
CtskP55097 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CtskP55097 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.94□□□□□ -0.18
CtskP55097 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CtskP55097 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.94□□□□□ -0.18
CtskP55097 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CtskP55097 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CtskP55097 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.93□□□□□ -0.18
CtskP55097 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CtskP55097 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CtskP55097 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CtskP55097 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CtskP55097 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CtskP55097 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CtskP55097 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms