Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Msh6P54276 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh6P54276 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.85■□□□□ 0.45
Msh6P54276 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.85■□□□□ 0.45
Msh6P54276 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Msh6P54276 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Mir1247-201ENSMUST00000116706 82 ntBASIC17.85■□□□□ 0.45
Msh6P54276 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.85■□□□□ 0.45
Msh6P54276 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.85■□□□□ 0.45
Msh6P54276 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Msh6P54276 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Msh6P54276 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Msh6P54276 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh6P54276 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Msh6P54276 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.84■□□□□ 0.45
Msh6P54276 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Msh6P54276 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Msh6P54276 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Msh6P54276 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.84■□□□□ 0.45
Msh6P54276 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.84■□□□□ 0.45
Msh6P54276 Gm29127-201ENSMUST00000188304 517 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Gm18905-201ENSMUST00000205454 928 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Msh6P54276 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Msh6P54276 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh6P54276 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.84■□□□□ 0.45
Msh6P54276 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.83■□□□□ 0.45
Msh6P54276 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.83■□□□□ 0.45
Msh6P54276 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.83■□□□□ 0.45
Msh6P54276 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.45
Msh6P54276 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Msh6P54276 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 Gm15429-201ENSMUST00000151268 798 ntBASIC17.83■□□□□ 0.45
Msh6P54276 Gm8584-201ENSMUST00000171982 758 ntBASIC17.83■□□□□ 0.45
Msh6P54276 Gm8652-201ENSMUST00000181363 964 ntBASIC17.83■□□□□ 0.45
Msh6P54276 Gm4971-201ENSMUST00000205991 1108 ntBASIC17.83■□□□□ 0.45
Msh6P54276 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.83■□□□□ 0.45
Msh6P54276 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.45
Msh6P54276 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh6P54276 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.83■□□□□ 0.44
Msh6P54276 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.83■□□□□ 0.44
Msh6P54276 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Msh6P54276 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msh6P54276 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msh6P54276 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Msh6P54276 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msh6P54276 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms